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ID Converter
Manual
1. Select Analysis Species
Amaranthus hypochondriacus (Phytozome ID: eg. AHYPO_012702-RA)
Amborella trichopoda (Phytozome ID: eg. evm_27.model.AmTr_v1.0_scaffold00029.77)
Ananas comosus (Phytozome ID: eg. Aco022555.1)
Aquilegia coerulea (Phytozome ID: eg. Aqcoe3G377900.1)
Arabidopsis halleri (Phytozome ID: eg. Araha.7678s0001.1)
Arabidopsis lyrata (Phytozome ID: eg. AL2G25500.t1)
Arabidopsis thaliana (TAIR genome locus: eg. AT1G24095)
Boechera stricta (Phytozome ID: Bostr.26959s0196.1)
Brachypodium distachyon (Phytozome ID: Bradi1g19650.1)
Brachypodium stacei (Phytozome ID: Brast06G032700.1)
Brassica oleracea capitata (Phytozome ID: Bol017079)
Brassica rapa (Phytozome ID: Brara.E03586.1)
Capsella grandiflora (Phytozome ID: Cagra.3823s0026.1)
Capsella rubella (Phytozome ID: Carubv10016453m)
Carica papaya (Phytozome ID: evm.model.supercontig_36.108)
Chlamydomonas reinhardtii (Phytozome ID: eg. Cre01.g016050.t1.2)
Citrus clementina (Phytozome ID: Ciclev10010885m)
Citrus sinensis (Phytozome ID: eg. orange1.1g000019m )
Coccomyxa subellipsoidea (Phytozome ID: eg. 28085)
Cucumis sativus (Phytozome ID: Cucsa.238490)
Daucus carota (Phytozome ID: eg. DCAR_011007)
Dunaliella salina (Phytozome ID: eg. Dusal.0327s00002.1)
Eucalyptus grandis (Phytozome ID: eg. Eucgr.I02351.1)
Eutrema salsugineum (Phytozome ID: eg. Thhalv10019869m)
Fragaria vesca (Phytozome ID: eg. mrna04218.1-v1.0-hybrid)
Glycine Max (Phytozome ID: eg. Glyma.18g275200)
Gossypium raimondii (Phytozome ID: eg. Gorai.001G206500.1)
Kalanchoe fedtschenkoi (Phytozome ID: eg. Kaladp0060s0027.1)
Kalanchoe laxiflora (Phytozome ID: eg. Kalax.0095s0070.1)
Linum usitatissimum (Phytozome ID: eg. Lus10028458)
Malus domestica (Phytozome ID: eg. MDP0000259414)
Manihot esculenta (Phytozome ID: eg. Manes.02G059900.1)
Marchantia polymorpha (Phytozome ID: eg. Mapoly0010s0094.1)
Medicago truncatula (Phytozome ID: eg. Medtr7g017100)
Micromonas pusilla (Phytozome ID: eg. 210696)
Micromonas sp (Phytozome ID: eg. 107163)
Mimulus guttatus (Phytozome ID: eg. Migut.H01155.1)
Musa acuminata (Phytozome ID: eg. GSMUA_Achr4T01370_001)
Oropetium thomaeum (Phytozome ID: eg. Oropetium_20150105_11175A)
Oryza Sativa (RAP-DB ID: eg. Os01g0100100)
Ostreococcus lucimarinus (Phytozome ID: eg. 50795)
Panicum hallii (Phytozome ID: eg. Pahal.C04337.1)
Panicum virgatum (Phytozome ID: eg. Pavir.Bb01600.1)
Phaseolus vulgaris (Phytozome ID: eg. Phvul.008G025700)
Physcomitrella patens (Phytozome ID: eg. Pp3c17_20000V3.1)
Populus trichocarpa (Phytozome ID: eg. Potri.017G101100.1)
Prunus persica (Phytozome ID: eg. Prupe.3G248400)
Ricinus communis (Phytozome ID: eg. 27383.m000156)
Salix purpurea (Phytozome ID: eg. SapurV1A.0645s0160.1)
Selaginella moellendorffii (Phytozome ID: eg. 98463)
Setaria italica (Phytozome ID: eg. Seita.2G412100.1)
Setaria viridis (Phytozome ID: eg. Sevir.1G000100.1)
Solanum lycopersicum (Phytozome ID: eg. Solyc02g089260.2)
Solanum tuberosum (Phytozome ID: eg. PGSC0003DMT400073947)
Sorghum bicolor (Phytozome ID: eg. Sobic.002G396500)
Sphagnum fallax (Phytozome ID: eg. Sphfalx0079s0102.1)
Spirodela polyrhiza (Phytozome ID: eg. Spipo0G0000100)
Theobroma cacao (Phytozome ID: eg. Thecc1EG000002t1)
Vitis vinifera (Phytozome ID: eg. GSVIVT01018783001)
Volvox carteri (Phytozome ID: eg. Vocar.0001s0003.1)
Zea Mays (MaizeGDB ID: eg. Zm00001d001848)
2. Paste or Upload Gene List
Paste Gene list
[Example]
ID Conversion
Upload Gene List
3. Select Reference Species
Arabidopsis thaliana
Oryza sativa
Zea mays
Glycine max
Solanum lycopersicum
4. Select Tools
A. Based on omics data
Transcriptomic Comparison Enrichment
Tissue Expression Priofile
Binding Factor Enrichment
B. Based on other source of information
KEGG Enrichment
GO Enrichment
InterPro Enrichment
5.
Advanced Options
Expression Enrichment parameters
FoldChange
Default: 2
PValue
Default: 0.05
Binding Factor Enrichment parameters
FoldChange
Default: 2
PValue
Default: 0.05
GO Enrichment parameters
FoldChange
Default: 2
PValue
Default: 0.05
KEGG Enrichment parameters
FoldChange
Default: 2
PValue
Default: 0.05
InterPro Enrichment parameters
FoldChange
Default: 2
PValue
Default: 0.05
6. Email
(optional)
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Plant Regulomics
| Develop by
Plant Bioinformatics and Functional Epigenomics Group,
SIPPE, CAS
